Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015845475.1_cds_XP_016509349.1_22289
CDS Infomation

[gene=LOC107826833] [db_xref=GeneID:107826833] [protein=pentatricopeptide repeat-containing protein At5g66520-like] [protein_id=XP_016509349.1] [location=16645..17943] [gbkey=CDS]
Sequence

ATGCAACCTGCACTTAAAAATCAATCCACACGGCAATTATTAAGACCCTTCAGTTCATGG
TCTTTTGCCATTAAAAATGCAAGATCACCTCGAAGAGCCTTGTCACTCTACGCTCAAATG
CAACGCCAAGCCATTCCCTTCGACAGTTTCGCCATTCTTTTCACTCTCAGATCATGCACC
CAGTTGCGCAACCTTCCCCTCATATGCCACCTACATGCCCATCTCCTCAAATTAGGCTTT
AATATCCATGTGTATGTTGCCACCTCTCTGCTTAACGCCTATGCTGGAACCTCGCTTGAG
TGTGCATACAAGCTGTTCGATGAAATTCCCGTGAGAAATACTGTCACGTGGAACACGATA
ATAACTTGCTTTTCTCGTTCCGGGGACGTTAAAGGAGCGAGGAAGATGTTCGATCAGATG
CCTTTGAGAGACCTAGCTTCGTGGTCGGCAATGATAGCTGGATACATGAACAATGGGCAT
TGGGAGGAAGGTGTGGCGCTCTTCCAAGAAATGGTTATGTTTGAACAACTAAAGCCTGAT
CAAGTGACCATTGGGCCAATATTGGCGGGCTGTTCTGAAATGGGTTCAATTGGTTTGCTC
CTTGGGAAATCAGTGCATGGTTTTGTCGTGAAGAATCATTGGGAACTTAATGTTGAGCTT
GGTACTTGTTTAGTAGACATGTATGCTAAATGTGGATTCTTGAATTTTGCTTCTCTGGTT
TTCGATATGATGAAAGATAGAAATGTCGTTACTTGGACTGCTTTAATTTGTGGAGCAGCA
AAACATGGTTTTGGAACTGAAGCGTTGGAGATATTCAAGAAAATGAGACAGGGGGGTGTG
CTACCTAACGAGTTTACGTTCACTGGGCTACTTAGTGCTTGTGTACAAGCAGGGCTGGTC
GATGAAGGTCGCGGATATTTCAAAATGATCAAAGAGTGTGGACTGAGACCAACAATTCAG
CATTATGGCTGCATGGTTGATTTATTTGGGAAGGCTGGGTTGTTAGGGGAAGCATATGAA
GTTATCAATACTATGTCACCCGAGCCTAACATAGTTATATGGGGTTCCTTTTTGTCATCT
TGCAAGTTGCATAAACAATTTGAGATGGCAGAGCGAGTGATTGAGAGGGTCATGAATGTG
GTGAGGCCAGAGAATGATGGAGGGGTTTATACCCTTATCTCAGACTTGTATGTTCTGGGT
GGTAAATGGGCCAAAGCCGAGAGGGTGAGGCAGTTGATGCTCCATCAACATGTGAGGAAA
GCCAGAGGATGTAGTTTTATACGAAATAATACAACATGA

Peptide Sequence

PEP ID

XP_016509349.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Nicotiana tabacum]
Sequence

MQPALKNQSTRQLLRPFSSWSFAIKNARSPRRALSLYAQMQRQAIPFDSFAILFTLRSCT
QLRNLPLICHLHAHLLKLGFNIHVYVATSLLNAYAGTSLECAYKLFDEIPVRNTVTWNTI
ITCFSRSGDVKGARKMFDQMPLRDLASWSAMIAGYMNNGHWEEGVALFQEMVMFEQLKPD
QVTIGPILAGCSEMGSIGLLLGKSVHGFVVKNHWELNVELGTCLVDMYAKCGFLNFASLV
FDMMKDRNVVTWTALICGAAKHGFGTEALEIFKKMRQGGVLPNEFTFTGLLSACVQAGLV
DEGRGYFKMIKECGLRPTIQHYGCMVDLFGKAGLLGEAYEVINTMSPEPNIVIWGSFLSS
CKLHKQFEMAERVIERVMNVVRPENDGGVYTLISDLYVLGGKWAKAERVRQLMLHQHVRK
ARGCSFIRNNTT

Transcript Sequence

Gene sequence data has not been registered.